RefSeq in MiGA
Last updated
Last updated
In this tutorial, we will create a genomes project including all the representative genomes available in RefSeq using MiGA alone. If you want to explore a more manual approach using bash
, see the .
Re-running and updating: If the following code fails at any point, for example due to a network interruption, you can simply re-run it, and it will take it from where it failed.
Of course, you can repeat for -T Bacteria
to get all prokaryotic genomes.
It is strongly recommended to use an to increase the number of allowed requests. Once you obtain one, you can pass it as an argument:
Or you can set it globally as an environmental variable before running miga
:
Now that your data is ready, you can fire up the daemon to start processing the data. For additional details, see :