MiGA Manual
AboutCodebaseMiGA Online
main
main
  • Introduction
  • Part I: What is MiGA?
    • How can MiGA help me?
    • Who is using MiGA?
    • Who is behind MiGA?
    • Definitions
  • Part II: Getting started
    • Requirements
      • Using Homebrew
      • Using apt-get
      • Using Conda
      • Installing from source
      • MyTaxa Utils
    • Installation
    • MiGA types
    • Input data
    • Distances
    • Clustering
  • Part III: Interfaces
    • MiGA API
    • MiGA CLI
    • MiGA Web
  • Part IV: Deploying examples
    • RefSeq in MiGA
    • Build a clade collection
    • Launching daemons
    • Setting up MiGA in a cluster
  • Part V: Additional details
    • Advanced configuration
    • MiGA workflow
    • Metadata
    • External Software
  • Part VI: Workflows
    • Quality
    • Dereplicate
    • Classify
    • Preprocess
    • Index
    • Summaries
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Part III: Interfaces

PreviousClusteringNextMiGA API

Last updated 4 years ago

The core of MiGA is not as useful if we cannot interact with it, and there is a variety of interfaces for that. At the lowest level, the documented is available for developers to communicate directly with MiGA, either through scripts or through the console. A convenient wrapper including most common tasks (and some not-so-common) is available as the MiGA . Finally, a graphical interface allowing result browsing and querying of projects is available as .

API
CLI
MiGA Web